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bcrsmatrix.hh
Go to the documentation of this file.
1// SPDX-FileCopyrightText: Copyright (C) DUNE Project contributors, see file LICENSE.md in module root
174 DUNE_THROW(BCRSMatrixError,"You can only create an ImplicitBuilder for a matrix in implicit build mode");
176 DUNE_THROW(BCRSMatrixError,"You can only create an ImplicitBuilder for a matrix with set size that has not been compressed() yet");
194 ImplicitMatrixBuilder(Matrix& m, size_type rows, size_type cols, size_type avg_cols_per_row, double overflow_fraction)
198 DUNE_THROW(BCRSMatrixError,"You can only set up a matrix for this ImplicitBuilder if it has no memory allocated yet");
483 };
553 DUNE_THROW(BCRSMatrixError,"You cannot use operator[] in implicit build mode before calling compress()");
565 DUNE_THROW(BCRSMatrixError,"You cannot use operator[] in implicit build mode before calling compress()");
811 DUNE_THROW(InvalidStateException,"BCRSMatrix can only be copy-constructed when source matrix is completely empty (size not set) or fully built)");
840 if (ready == building && (build_mode == unknown || build_mode == random || build_mode == row_wise) && (bm == row_wise || bm == random))
843 DUNE_THROW(InvalidStateException, "Matrix structure cannot be changed at this stage anymore (ready == "<<ready<<").");
869 DUNE_THROW(Dune::BCRSMatrixError,"number of non-zeroes may not be set in implicit mode, use setImplicitBuildModeParameters() instead");
900 DUNE_THROW(InvalidStateException,"You cannot modify build mode parameters at this stage anymore");
916 if (!((ready == notAllocated || ready == built) && (Mat.ready == notAllocated || Mat.ready == built)))
917 DUNE_THROW(InvalidStateException,"BCRSMatrix can only be copied when both target and source are empty or fully built)");
970 DUNE_THROW(BCRSMatrixError,"creation only allowed if row wise allocation was requested in the constructor");
1266 dwarn << "WARNING: size of row "<< i.index()<<" is "<<j.offset()<<". But was specified as being "<< (*i).end().offset()
1267 <<". This means you are wasting valuable space and creating additional cache misses!"<<std::endl;
1369 DUNE_THROW(InvalidStateException,"You may only call compress() at the end of the 'building' stage");
1416 "Please increase either the average number of entries per row or the compressionBufferSize value."
1431 "Please increase either the average number of entries per row or the compressionBufferSize value."
1488 DUNE_THROW(BCRSMatrixError,"You can only call arithmetic operations on fully built BCRSMatrix instances");
1516 DUNE_THROW(BCRSMatrixError,"You can only call arithmetic operations on fully built BCRSMatrix instances");
1549 DUNE_THROW(BCRSMatrixError,"You can only call arithmetic operations on fully built BCRSMatrix instances");
1571 DUNE_THROW(BCRSMatrixError,"You can only call arithmetic operations on fully built BCRSMatrix instances");
1596 DUNE_THROW(BCRSMatrixError,"You can only call arithmetic operations on fully built BCRSMatrix instances");
1616 DUNE_THROW(BCRSMatrixError,"You can only call arithmetic operations on fully built BCRSMatrix instances");
1642 DUNE_THROW(BCRSMatrixError,"You can only call arithmetic operations on fully built BCRSMatrix instances");
1665 DUNE_THROW(BCRSMatrixError,"You can only call arithmetic operations on fully built BCRSMatrix instances");
1688 DUNE_THROW(BCRSMatrixError,"You can only call arithmetic operations on fully built BCRSMatrix instances");
1711 DUNE_THROW(BCRSMatrixError,"You can only call arithmetic operations on fully built BCRSMatrix instances");
1726 DUNE_THROW(BCRSMatrixError,"You can only call arithmetic operations on fully built BCRSMatrix instances");
1770 DUNE_THROW(BCRSMatrixError,"You can only call arithmetic operations on fully built BCRSMatrix instances");
1793 DUNE_THROW(BCRSMatrixError,"You can only call arithmetic operations on fully built BCRSMatrix instances");
1816 DUNE_THROW(BCRSMatrixError,"You can only call arithmetic operations on fully built BCRSMatrix instances");
1839 DUNE_THROW(BCRSMatrixError,"You can only call arithmetic operations on fully built BCRSMatrix instances");
1864 DUNE_THROW(BCRSMatrixError,"You can only call arithmetic operations on fully built BCRSMatrix instances");
1887 DUNE_THROW(BCRSMatrixError,"You can only call arithmetic operations on fully built BCRSMatrix instances");
1907 DUNE_THROW(BCRSMatrixError,"You can only call arithmetic operations on fully built BCRSMatrix instances");
1927 DUNE_THROW(BCRSMatrixError,"You can only call arithmetic operations on fully built BCRSMatrix instances");
1950 DUNE_THROW(BCRSMatrixError,"You can only call arithmetic operations on fully built BCRSMatrix instances");
2033 size_type allocationSize_; //allocated size of a and j arrays, except in implicit mode: nnz_==allocationsSize_
2205 void allocate(size_type rows, size_type columns, size_type allocationSize, bool allocateRows, bool allocate_data)
2217 DUNE_THROW(InvalidStateException,"Rows have already been allocated, cannot allocate a second time");
2268 DUNE_THROW(InvalidStateException,"implicit_allocate() may only be called in implicit build mode");
2274 DUNE_THROW(InvalidStateException,"You have to set the implicit build mode parameters before starting to build the matrix");
Some handy generic functions for ISTL matrices.
Helper functions for determining the vector/matrix block level.
This file implements a vector space as a tensor product of a given vector space. The number of compon...
T & dereference() const
void decrement()
int size() const
reference elementAt(size_type i) const
void increment()
void advance(difference_type n)
void construct(pointer p, const_reference value)
void * allocate()
void destroy(pointer p)
#define DUNE_THROW(E, m)
DWarnType dwarn
Reference get(const RAPropertyMapHelper< Reference, PropertyMap > &pmap, const Key &key)
T real_type
Definition matrixutils.hh:211
Statistics about compression achieved in implicit mode.
Definition bcrsmatrix.hh:88
size_type overflow_total
total number of elements written to the overflow area during construction.
Definition bcrsmatrix.hh:94
size_type maximum
maximum number of non-zeroes per row.
Definition bcrsmatrix.hh:92
double avg
average number of non-zeroes per row.
Definition bcrsmatrix.hh:90
double mem_ratio
fraction of wasted memory resulting from non-used overflow area.
Definition bcrsmatrix.hh:99
A wrapper for uniform access to the BCRSMatrix during and after the build stage in implicit build mod...
Definition bcrsmatrix.hh:117
Matrix::block_type block_type
The block_type of the underlying matrix.
Definition bcrsmatrix.hh:125
ImplicitMatrixBuilder(Matrix &m)
Creates an ImplicitMatrixBuilder for matrix m.
Definition bcrsmatrix.hh:170
ImplicitMatrixBuilder(Matrix &m, size_type rows, size_type cols, size_type avg_cols_per_row, double overflow_fraction)
Sets up matrix m for implicit construction using the given parameters and creates an ImplicitBmatrixu...
Definition bcrsmatrix.hh:194
size_type M() const
The number of columns in the matrix.
Definition bcrsmatrix.hh:217
Matrix::size_type size_type
The size_type of the underlying matrix.
Definition bcrsmatrix.hh:128
row_object operator[](size_type i) const
Returns a proxy for entries in row i.
Definition bcrsmatrix.hh:205
size_type N() const
The number of rows in the matrix.
Definition bcrsmatrix.hh:211
Proxy row object for entry access.
Definition bcrsmatrix.hh:137
block_type & operator[](size_type j) const
Returns entry in column j.
Definition bcrsmatrix.hh:142
typename Imp::BlockTraits< B >::field_type field_type
export the type representing the field
Definition bcrsmatrix.hh:488
std::allocator_traits< A >::template rebind_alloc< row_type > rowAllocator_
Definition bcrsmatrix.hh:2025
bool exists(size_type i, size_type j) const
return true if (i,j) is in pattern
Definition bcrsmatrix.hh:2007
BuildStage buildStage() const
The current build stage of the matrix.
Definition bcrsmatrix.hh:1993
void copyWindowStructure(const BCRSMatrix &Mat)
Copy the window structure from another matrix.
Definition bcrsmatrix.hh:2122
B & entry(size_type row, size_type col)
Returns reference to entry (row,col) of the matrix.
Definition bcrsmatrix.hh:1296
void usmhv(const field_type &alpha, const X &x, Y &y) const
y += alpha A^H x
Definition bcrsmatrix.hh:1835
RealRowIterator< const row_type > const_iterator
The const iterator over the matrix rows.
Definition bcrsmatrix.hh:707
static constexpr unsigned int blocklevel
increment block level counter
Definition bcrsmatrix.hh:507
void allocate(size_type rows, size_type columns, size_type allocationSize, bool allocateRows, bool allocate_data)
Allocate memory for the matrix structure.
Definition bcrsmatrix.hh:2205
BCRSMatrix & axpy(field_type alpha, const BCRSMatrix &b)
Add the scaled entries of another matrix to this one.
Definition bcrsmatrix.hh:1592
FieldTraits< ft >::real_type infinity_norm_real() const
simplified infinity norm (uses Manhattan norm for complex values)
Definition bcrsmatrix.hh:1905
void deallocate(bool deallocateRows=true)
deallocate memory of the matrix.
Definition bcrsmatrix.hh:2139
Iterator RowIterator
rename the iterators for easier access
Definition bcrsmatrix.hh:701
row_type & operator[](size_type i)
random access to the rows
Definition bcrsmatrix.hh:549
void endrowsizes()
indicate that size of all rows is defined
Definition bcrsmatrix.hh:1149
void incrementrowsize(size_type i, size_type s=1)
increment size of row i by s (1 by default)
Definition bcrsmatrix.hh:1138
size_type nonzeroes() const
number of blocks that are stored (the number of blocks that possibly are nonzero)
Definition bcrsmatrix.hh:1984
ConstIterator ConstRowIterator
rename the const row iterator for easier access
Definition bcrsmatrix.hh:738
void setrowsize(size_type i, size_type s)
Set number of indices in row i to s.
Definition bcrsmatrix.hh:1117
BCRSMatrix & operator*=(const field_type &k)
vector space multiplication with scalar
Definition bcrsmatrix.hh:1484
std::allocator_traits< A >::template rebind_alloc< size_type > sizeAllocator_
Definition bcrsmatrix.hh:2027
RealRowIterator< row_type > iterator
The iterator over the (mutable matrix rows.
Definition bcrsmatrix.hh:671
void usmtv(const field_type &alpha, const X &x, Y &y) const
y += alpha A^T x
Definition bcrsmatrix.hh:1766
RealRowIterator< const row_type > ConstIterator
Definition bcrsmatrix.hh:708
@ implicit
Build entries randomly with an educated guess for the number of entries per row.
Definition bcrsmatrix.hh:539
BCRSMatrix(size_type _n, size_type _m, size_type _nnz, BuildMode bm)
matrix with known number of nonzeroes
Definition bcrsmatrix.hh:756
::Dune::CompressionStatistics< size_type > CompressionStatistics
The type for the statistics object returned by compress()
Definition bcrsmatrix.hh:503
BCRSMatrix & operator-=(const BCRSMatrix &b)
Subtract the entries of another matrix from this one.
Definition bcrsmatrix.hh:1567
BCRSMatrix(const BCRSMatrix &Mat)
copy constructor
Definition bcrsmatrix.hh:805
void setIndices(size_type row, It begin, It end)
Set all column indices for row from the given iterator range.
Definition bcrsmatrix.hh:1234
void addindex(size_type row, size_type col)
add index (row,col) to the matrix
Definition bcrsmatrix.hh:1191
std::map< std::pair< size_type, size_type >, B > OverflowType
Definition bcrsmatrix.hh:2049
row_type::Iterator ColIterator
Iterator for the entries of each row.
Definition bcrsmatrix.hh:704
FieldTraits< field_type >::real_type frobenius_norm() const
frobenius norm: sqrt(sum over squared values of entries)
Definition bcrsmatrix.hh:1877
A::size_type size_type
The type for the index access and the size.
Definition bcrsmatrix.hh:500
BCRSMatrix & operator/=(const field_type &k)
vector space division by scalar
Definition bcrsmatrix.hh:1512
BCRSMatrix & operator+=(const BCRSMatrix &b)
Add the entries of another matrix to this one.
Definition bcrsmatrix.hh:1545
BCRSMatrix(size_type _n, size_type _m, size_type _avg, double compressionBufferSize, BuildMode bm)
construct matrix with a known average number of entries per row
Definition bcrsmatrix.hh:784
CreateIterator createend()
get create iterator pointing to one after the last block
Definition bcrsmatrix.hh:1103
FieldTraits< field_type >::real_type frobenius_norm2() const
square of frobenius norm, need for block recursion
Definition bcrsmatrix.hh:1860
row_type::ConstIterator ConstColIterator
Const iterator to the entries of a row.
Definition bcrsmatrix.hh:741
void usmv(F &&alpha, const X &x, Y &y) const
y += alpha A x
Definition bcrsmatrix.hh:1684
size_type getrowsize(size_type i) const
get current number of indices in row i
Definition bcrsmatrix.hh:1128
size_type M() const
number of columns (counted in blocks)
Definition bcrsmatrix.hh:1978
Imp::CompressedBlockVectorWindow< B, A > row_type
implement row_type with compressed vector
Definition bcrsmatrix.hh:497
CreateIterator createbegin()
get initial create iterator
Definition bcrsmatrix.hh:1097
@ rowSizesBuilt
The row sizes of the matrix are known.
Definition bcrsmatrix.hh:480
@ notbuilt
Matrix is not built at all, no memory has been allocated, build mode and size can still be set.
Definition bcrsmatrix.hh:471
@ notAllocated
Matrix is not built at all, no memory has been allocated, build mode and size can still be set.
Definition bcrsmatrix.hh:473
@ building
Matrix is currently being built, some memory has been allocated, build mode and size are fixed.
Definition bcrsmatrix.hh:475
BuildMode buildMode() const
The currently selected build mode of the matrix.
Definition bcrsmatrix.hh:1999
FieldTraits< ft >::real_type infinity_norm() const
infinity norm (row sum norm, how to generalize for blocks?)
Definition bcrsmatrix.hh:1885
B block_type
export the type representing the components
Definition bcrsmatrix.hh:491
void implicit_allocate(size_type _n, size_type _m)
organizes allocation implicit mode calculates correct array size to be allocated and sets the the win...
Definition bcrsmatrix.hh:2265
void setImplicitBuildModeParameters(size_type _avg, double compressionBufferSize)
Set parameters needed for creation in implicit build mode.
Definition bcrsmatrix.hh:889
BCRSMatrix(size_type _n, size_type _m, BuildMode bm)
matrix with unknown number of nonzeroes
Definition bcrsmatrix.hh:765
void endindices()
indicate that all indices are defined, check consistency
Definition bcrsmatrix.hh:1248
CompressionStatistics compress()
Finishes the buildstage in implicit mode.
Definition bcrsmatrix.hh:1360
void setDataPointers()
Set data pointers for all rows.
Definition bcrsmatrix.hh:2103
std::allocator_traits< A >::template rebind_alloc< B > allocator_
Definition bcrsmatrix.hh:2023
size_type N() const
number of rows (counted in blocks)
Definition bcrsmatrix.hh:1972
void setBuildMode(BuildMode bm)
Sets the build mode of the matrix.
Definition bcrsmatrix.hh:833
void setSize(size_type rows, size_type columns, size_type nnz=0)
Set the size of the matrix.
Definition bcrsmatrix.hh:861
void setWindowPointers(ConstRowIterator row)
Definition bcrsmatrix.hh:2052
BCRSMatrix & operator=(const BCRSMatrix &Mat)
assignment
Definition bcrsmatrix.hh:911
void setColumnPointers(ConstRowIterator row)
Copy row sizes from iterator range starting at row and set column index pointers for all rows.
Definition bcrsmatrix.hh:2077
ConstIterator end() const
Get const iterator to one beyond last row.
Definition bcrsmatrix.hh:718
ConstIterator begin() const
Get const iterator to first row.
Definition bcrsmatrix.hh:712
A allocator_type
export the allocator type
Definition bcrsmatrix.hh:494
RealRowIterator()
empty constructor, use with care!
Definition bcrsmatrix.hh:596
bool equals(const RealRowIterator< ValueType > &other) const
equality
Definition bcrsmatrix.hh:624
std::remove_const< T >::type ValueType
The unqualified value type.
Definition bcrsmatrix.hh:583
RealRowIterator(const RealRowIterator< ValueType > &it)
Definition bcrsmatrix.hh:600
bool equals(const RealRowIterator< const ValueType > &other) const
equality
Definition bcrsmatrix.hh:631
RealRowIterator(row_type *_p, size_type _i)
constructor
Definition bcrsmatrix.hh:591
std::ptrdiff_t distanceTo(const RealRowIterator< const ValueType > &other) const
Definition bcrsmatrix.hh:617
size_type index() const
return index
Definition bcrsmatrix.hh:606
std::ptrdiff_t distanceTo(const RealRowIterator< ValueType > &other) const
Definition bcrsmatrix.hh:611
Iterator class for sequential creation of blocks
Definition bcrsmatrix.hh:957
bool operator==(const CreateIterator &it) const
equality
Definition bcrsmatrix.hh:1052
CreateIterator & operator++()
prefix increment
Definition bcrsmatrix.hh:977
size_type index() const
The number of the row that the iterator currently points to.
Definition bcrsmatrix.hh:1058
bool operator!=(const CreateIterator &it) const
inequality
Definition bcrsmatrix.hh:1046
CreateIterator(BCRSMatrix &_Mat, size_type _i)
constructor
Definition bcrsmatrix.hh:960
void insert(size_type j)
put column index in row
Definition bcrsmatrix.hh:1064
bool contains(size_type j)
return true if column index is in row
Definition bcrsmatrix.hh:1070
size_type size() const
Get the current row size.
Definition bcrsmatrix.hh:1079
typename BCRSMatrix< B, A >::field_type field_type
Definition bcrsmatrix.hh:2299
typename FieldTraits< field_type >::real_type real_type
Definition bcrsmatrix.hh:2300
Thrown when the compression buffer used by the implicit BCRSMatrix construction is exhausted.
Definition istlexception.hh:37
T block_type
Export the type representing the components.
Definition matrix.hh:568
Definition matrixutils.hh:538
T accumulate(T... args)
T allocate(T... args)
T cbegin(T... args)
T clear(T... args)
T copy_backward(T... args)
T copy(T... args)
T deallocate(T... args)
T cend(T... args)
T endl(T... args)
T find(T... args)
T get(T... args)
T insert(T... args)
T lower_bound(T... args)
T make_pair(T... args)
T max(T... args)
T reset(T... args)
T resize(T... args)
T size(T... args)
T sort(T... args)
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